Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HY78_RS15905 | Not Available | Negative | 3302422 - 3303294 | 31185.5 |
| uroporphyrinogen-iii synthase | HY78_RS15910 | Not Available | Negative | 3303326 - 3304015 | 23829.6 |
| hydroxymethylbilane synthase | HY78_RS15915 | Not Available | Negative | 3304012 - 3304938 | 31971.7 |
| mate family efflux transporter | HY78_RS15920 | Not Available | Negative | 3304996 - 3306378 | 49378.8 |
| hypothetical protein | HY78_RS15925 | Not Available | Negative | 3306436 - 3307965 | 54308.8 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | HY78_RS15930 | Not Available | Positive | 3308094 - 3309131 | 35205.5 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | HY78_RS15935 | Not Available | Positive | 3309128 - 3310123 | 33610.7 |
| outer membrane protein assembly factor bame | HY78_RS15940 | Not Available | Negative | 3310352 - 3310834 | 17250.4 |
| ubiquinol-cytochrome c chaperone family protein | HY78_RS15945 | Not Available | Positive | 3310983 - 3311504 | 18563.5 |
| duf177 domain-containing protein | HY78_RS15950 | Not Available | Positive | 3311471 - 3312031 | 19388.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
