Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | HY78_RS15855 | Not Available | Negative | 3293283 - 3293726 | 15682.7 |
| nuclear transport factor 2 family protein | HY78_RS15860 | Not Available | Negative | 3293723 - 3294241 | 19447.2 |
| crp/fnr family transcriptional regulator | HY78_RS15865 | Not Available | Negative | 3294309 - 3295037 | 25763.2 |
| tetr/acrr family transcriptional regulator | HY78_RS15870 | Not Available | Positive | 3295121 - 3296410 | 46947.5 |
| glycine cleavage system protein r | HY78_RS15875 | Not Available | Negative | 3296532 - 3297059 | 18124.6 |
| heparinase ii/iii domain-containing protein | HY78_RS15880 | Not Available | Negative | 3297142 - 3298869 | 61891.0 |
| ribulose-phosphate 3-epimerase | HY78_RS15885 | Not Available | Negative | 3298880 - 3299542 | 23184.1 |
| rsmb/nop family class i sam-dependent rna methyltransferase | HY78_RS15890 | Not Available | Negative | 3299724 - 3300995 | 44057.5 |
| zinc metalloprotease htpx | HY78_RS15895 | Not Available | Negative | 3301050 - 3302000 | 33105.4 |
| duf1674 domain-containing protein | HY78_RS15900 | Not Available | Positive | 3302076 - 3302255 | 6318.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
