Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | HY78_RS15805 | Not Available | Negative | 3280275 - 3281198 | 33555.1 |
| 2-oxoadipate dioxygenase/decarboxylase family protein | HY78_RS15810 | Not Available | Positive | 3281293 - 3282315 | 36217.7 |
| atp-binding protein | HY78_RS15815 | Not Available | Negative | 3282296 - 3283402 | 39881.0 |
| response regulator transcription factor | HY78_RS15820 | Not Available | Negative | 3283402 - 3284163 | 27520.3 |
| efflux rnd transporter periplasmic adaptor subunit | HY78_RS15825 | Not Available | Positive | 3284243 - 3285382 | 40204.6 |
| multidrug efflux rnd transporter permease subunit | HY78_RS15830 | Not Available | Positive | 3285397 - 3288507 | 110823.0 |
| efflux transporter outer membrane subunit | HY78_RS15835 | Not Available | Positive | 3288510 - 3289952 | 51571.3 |
| pentapeptide repeat-containing protein | HY78_RS15840 | Not Available | Negative | 3289967 - 3290665 | 25907.6 |
| spermidine synthase | HY78_RS15845 | Not Available | Positive | 3290759 - 3291433 | 23610.6 |
| mfs transporter | HY78_RS15850 | Not Available | Negative | 3291437 - 3293107 | 59177.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
