Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonase/enoyl-coa hydratase family protein | HY78_RS15355 | Not Available | Negative | 3180067 - 3180840 | 27439.1 |
| nad(p)h-dependent flavin oxidoreductase | HY78_RS15360 | Not Available | Negative | 3180870 - 3181844 | 34596.8 |
| nad-dependent epimerase/dehydratase family protein | HY78_RS15365 | Not Available | Positive | 3182067 - 3183005 | 34042.5 |
| nuclear transport factor 2 family protein | HY78_RS15370 | Not Available | Positive | 3182995 - 3183501 | 19660.9 |
| sdr family nad(p)-dependent oxidoreductase | HY78_RS15375 | Not Available | Positive | 3183498 - 3184253 | 25901.3 |
| hypothetical protein | HY78_RS15380 | Not Available | Positive | 3184354 - 3184698 | 12625.9 |
| cysteine hydrolase family protein | HY78_RS15385 | Not Available | Negative | 3184687 - 3185343 | 23578.2 |
| mfs transporter | HY78_RS15390 | Not Available | Negative | 3185350 - 3187014 | 58657.1 |
| membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate family | HY78_RS15395 | Not Available | Positive | 3187220 - 3189574 | 84426.7 |
| n-acyl-d-amino-acid deacylase family protein | HY78_RS15400 | Not Available | Negative | 3189559 - 3191298 | 62309.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
