Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | HY78_RS14905 | Not Available | Positive | 3073054 - 3073371 | 11162.1 |
| tonb-dependent receptor | HY78_RS14910 | Not Available | Negative | 3073391 - 3074287 | 31407.9 |
| hypothetical protein | HY78_RS14915 | Not Available | Positive | 3074619 - 3075011 | 13323.4 |
| m48 family metalloprotease | HY78_RS14920 | Not Available | Positive | 3075052 - 3076875 | 63578.9 |
| sulfonate abc transporter permease | HY78_RS14925 | Not Available | Positive | 3076872 - 3079949 | 106486.0 |
| hypothetical protein | HY78_RS14930 | Not Available | Negative | 3080018 - 3080203 | 6769.15 |
| hypothetical protein | HY78_RS14935 | Not Available | Negative | 3080270 - 3080812 | 19317.3 |
| metal-dependent hydrolase family protein | HY78_RS14940 | Not Available | Positive | 3080881 - 3082161 | 45134.9 |
| hypothetical protein | HY78_RS14945 | Not Available | Positive | 3082340 - 3082645 | 10554.4 |
| 4-hydroxy-2-oxovalerate aldolase | HY78_RS14950 | Not Available | Negative | 3082653 - 3083690 | 37227.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
