Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-associated lipoprotein pal | HY78_RS14855 | Not Available | Positive | 3065223 - 3065723 | 17436.4 |
| spfh domain-containing protein | HY78_RS14860 | Not Available | Positive | 3065861 - 3066763 | 32518.3 |
| hypothetical protein | HY78_RS14865 | Not Available | Positive | 3066771 - 3066968 | 7309.86 |
| hypothetical protein | HY78_RS14870 | Not Available | Negative | 3067121 - 3067573 | 17102.2 |
| s1/p1 nuclease | HY78_RS14875 | Not Available | Negative | 3067680 - 3068522 | 31195.2 |
| isoaspartyl peptidase/l-asparaginase family protein | HY78_RS14880 | Not Available | Negative | 3068522 - 3069478 | 32662.2 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | HY78_RS14885 | Not Available | Positive | 3069660 - 3070784 | 39643.7 |
| dmt family transporter | HY78_RS14890 | Not Available | Positive | 3070828 - 3071715 | 31304.3 |
| gnat family n-acetyltransferase | HY78_RS14895 | Not Available | Positive | 3071712 - 3072191 | 17652.8 |
| duf1345 domain-containing protein | HY78_RS14900 | Not Available | Negative | 3072363 - 3073007 | 23051.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
