Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yebc/pmpr family dna-binding transcriptional regulator | HY78_RS14805 | Not Available | Positive | 3056057 - 3056800 | 26350.0 |
| crossover junction endodeoxyribonuclease ruvc | HY78_RS14810 | Not Available | Positive | 3056926 - 3057423 | 17158.9 |
| holliday junction branch migration protein ruva | HY78_RS14815 | Not Available | Positive | 3057420 - 3058019 | 19973.3 |
| tetratricopeptide repeat protein | HY78_RS14820 | Not Available | Positive | 3058073 - 3060037 | 71303.5 |
| holliday junction branch migration dna helicase ruvb | HY78_RS14825 | Not Available | Positive | 3060104 - 3061132 | 37509.3 |
| ybgc/fadm family acyl-coa thioesterase | HY78_RS14830 | Not Available | Positive | 3061281 - 3061724 | 16794.2 |
| protein tolq | HY78_RS14835 | Not Available | Positive | 3061729 - 3062427 | 24897.2 |
| protein tolr | HY78_RS14840 | Not Available | Positive | 3062427 - 3062930 | 17267.0 |
| cell envelope integrity protein tola | HY78_RS14845 | Not Available | Positive | 3062927 - 3063742 | 28305.6 |
| tol-pal system beta propeller repeat protein tolb | HY78_RS14850 | Not Available | Positive | 3063810 - 3065129 | 47059.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
