Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter outer membrane subunit | HY78_RS14755 | Not Available | Positive | 3044153 - 3045664 | 52961.1 |
| efflux rnd transporter periplasmic adaptor subunit | HY78_RS14760 | Not Available | Positive | 3045664 - 3047079 | 48613.1 |
| abc transporter atp-binding protein | HY78_RS14765 | Not Available | Positive | 3047069 - 3047797 | 26342.7 |
| abc transporter permease | HY78_RS14770 | Not Available | Positive | 3047931 - 3049139 | 43468.2 |
| ef-hand domain-containing protein | HY78_RS14775 | Not Available | Positive | 3049136 - 3049846 | 25680.3 |
| response regulator | HY78_RS14780 | Not Available | Positive | 3049843 - 3050550 | 25753.2 |
| atp-binding protein | HY78_RS14785 | Not Available | Positive | 3050547 - 3051977 | 52161.5 |
| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha | HY78_RS14790 | Not Available | Positive | 3052247 - 3053506 | 46242.6 |
| alpha-ketoacid dehydrogenase subunit beta | HY78_RS14795 | Not Available | Positive | 3053586 - 3054590 | 36814.0 |
| dihydrolipoamide acetyltransferase family protein | HY78_RS14800 | Not Available | Positive | 3054597 - 3055886 | 45384.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
