Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | HY78_RS14205 | Not Available | Positive | 2942412 - 2944889 | 89759.5 |
| carboxymuconolactone decarboxylase family protein | HY78_RS14210 | Not Available | Negative | 2945037 - 2945594 | 19809.6 |
| voc family protein | HY78_RS14215 | Not Available | Negative | 2945667 - 2946200 | 19144.0 |
| aromatic ring-hydroxylating oxygenase subunit alpha | HY78_RS14220 | Not Available | Positive | 2946304 - 2947659 | 50754.5 |
| aromatic ring-hydroxylating oxygenase subunit alpha | HY78_RS14225 | Not Available | Positive | 2947656 - 2949002 | 50128.8 |
| sdr family oxidoreductase | HY78_RS14230 | Not Available | Negative | 2949057 - 2949827 | 26689.3 |
| sdr family oxidoreductase | HY78_RS14235 | Not Available | Negative | 2949854 - 2950780 | 32869.1 |
| sdr family oxidoreductase | HY78_RS14240 | Not Available | Positive | 2950979 - 2951785 | 27740.3 |
| voc family protein | HY78_RS14245 | Not Available | Positive | 2951793 - 2952272 | 17717.9 |
| voc family protein | HY78_RS14250 | Not Available | Negative | 2952264 - 2952788 | 19225.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
