Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thua domain-containing protein | HY78_RS14155 | Not Available | Positive | 2932620 - 2933351 | 26969.2 |
| tetr/acrr family transcriptional regulator | HY78_RS14160 | Not Available | Negative | 2933339 - 2934049 | 26074.5 |
| sdr family nad(p)-dependent oxidoreductase | HY78_RS14165 | Not Available | Positive | 2934284 - 2935045 | 26688.1 |
| aromatic ring-hydroxylating oxygenase subunit alpha | HY78_RS14170 | Not Available | Positive | 2935059 - 2936390 | 50902.1 |
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | HY78_RS14175 | Not Available | Positive | 2936401 - 2937375 | 34743.1 |
| alpha-ketoacid dehydrogenase subunit beta | HY78_RS14180 | Not Available | Positive | 2937390 - 2938400 | 35463.9 |
| dihydrolipoamide acetyltransferase family protein | HY78_RS14185 | Not Available | Positive | 2938412 - 2939812 | 48002.1 |
| putative quinol monooxygenase | HY78_RS14190 | Not Available | Negative | 2939934 - 2940230 | 11290.5 |
| class i adenylate-forming enzyme family protein | HY78_RS14195 | Not Available | Negative | 2940227 - 2941864 | 58364.5 |
| putative quinol monooxygenase | HY78_RS14200 | Not Available | Negative | 2941861 - 2942157 | 11410.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
