Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-keto-5-aminohexanoate cleavage protein | HY78_RS14005 | Not Available | Positive | 2898502 - 2899431 | 33826.7 |
| smp-30/gluconolactonase/lre family protein | HY78_RS14010 | Not Available | Positive | 2899428 - 2900465 | 37465.5 |
| fumarylacetoacetate hydrolase family protein | HY78_RS14015 | Not Available | Positive | 2900504 - 2901535 | 37274.2 |
| tonb-dependent receptor | HY78_RS14020 | Not Available | Positive | 2901708 - 2903900 | 79515.6 |
| tonb-dependent receptor | HY78_RS14025 | Not Available | Positive | 2904417 - 2906609 | 78484.7 |
| mbl fold metallo-hydrolase | HY78_RS14030 | Not Available | Positive | 2906609 - 2907622 | 34862.7 |
| fad-dependent monooxygenase | HY78_RS14035 | Not Available | Positive | 2907643 - 2909385 | 61901.4 |
| tetr/acrr family transcriptional regulator | HY78_RS14040 | Not Available | Negative | 2909575 - 2910408 | 30108.5 |
| nuclear transport factor 2 family protein | HY78_RS14045 | Not Available | Positive | 2910414 - 2910971 | 20309.2 |
| fumarylacetoacetate hydrolase family protein | HY78_RS14050 | Not Available | Positive | 2910968 - 2911864 | 31703.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
