Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system vapc family toxin | HY78_RS13955 | Not Available | Positive | 2888497 - 2888883 | 13475.4 |
| amidohydrolase family protein | HY78_RS13960 | Not Available | Positive | 2888987 - 2890048 | 37856.4 |
| acyl-coa dehydrogenase family protein | HY78_RS13965 | Not Available | Negative | 2890105 - 2891319 | 43241.7 |
| voc family protein | HY78_RS13970 | Not Available | Negative | 2891596 - 2892600 | 37398.4 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | HY78_RS13975 | Not Available | Negative | 2892581 - 2893669 | 39569.5 |
| nuclear transport factor 2 family protein | HY78_RS13980 | Not Available | Positive | 2893724 - 2894269 | 19797.8 |
| amidohydrolase family protein | HY78_RS13985 | Not Available | Positive | 2894281 - 2895345 | 38114.6 |
| sdr family nad(p)-dependent oxidoreductase | HY78_RS13990 | Not Available | Negative | 2895490 - 2896374 | 30179.2 |
| sdr family oxidoreductase | HY78_RS13995 | Not Available | Negative | 2896400 - 2897188 | 26832.3 |
| lysr family transcriptional regulator | HY78_RS14000 | Not Available | Positive | 2897376 - 2898326 | 34840.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
