Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | HY78_RS13905 | Not Available | Negative | 2879216 - 2879884 | 23043.3 |
| hemolysin family protein | HY78_RS13910 | Not Available | Positive | 2879998 - 2881338 | 47922.4 |
| hu family dna-binding protein | HY78_RS13915 | Not Available | Positive | 2881539 - 2881814 | 9225.07 |
| lysr family transcriptional regulator | HY78_RS13920 | Not Available | Positive | 2881867 - 2882904 | 37196.0 |
| caib/baif coa transferase family protein | HY78_RS13925 | Not Available | Positive | 2882943 - 2884205 | 44434.5 |
| hydroxymethylglutaryl-coa lyase | HY78_RS13930 | Not Available | Positive | 2884202 - 2885125 | 31874.3 |
| 3-isopropylmalate dehydratase large subunit | HY78_RS13935 | Not Available | Positive | 2885122 - 2886564 | 50335.3 |
| 3-isopropylmalate dehydratase small subunit | HY78_RS13940 | Not Available | Positive | 2886568 - 2887185 | 22256.8 |
| sdr family oxidoreductase | HY78_RS13945 | Not Available | Negative | 2887202 - 2888071 | 31301.8 |
| abrb/maze/spovt family dna-binding domain-containing protein | HY78_RS13950 | Not Available | Positive | 2888210 - 2888494 | 10533.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
