Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr/smtb family transcription factor | HY78_RS13505 | Not Available | Positive | 2791743 - 2792714 | 34968.1 |
| methylenetetrahydrofolate reductase | HY78_RS13510 | Not Available | Positive | 2792711 - 2793655 | 34143.6 |
| homocysteine s-methyltransferase family protein | HY78_RS13515 | Not Available | Positive | 2793652 - 2794713 | 38079.2 |
| methionine synthase | HY78_RS13520 | Not Available | Positive | 2794850 - 2797459 | 95065.8 |
| right-handed parallel beta-helix repeat-containing protein | HY78_RS13525 | Not Available | Positive | 2797514 - 2798518 | 35582.7 |
| alkaline phosphatase family protein | HY78_RS13530 | Not Available | Negative | 2798522 - 2800180 | 58183.1 |
| amidohydrolase family protein | HY78_RS13535 | Not Available | Negative | 2800242 - 2801849 | 56933.9 |
| nad(p)-dependent oxidoreductase | HY78_RS13540 | Not Available | Negative | 2802070 - 2802939 | 30177.0 |
| threonine ammonia-lyase | HY78_RS13545 | Not Available | Positive | 2803011 - 2804258 | 44444.8 |
| arginyltransferase | HY78_RS13550 | Not Available | Positive | 2804624 - 2805424 | 29637.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
