Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | HY78_RS13455 | Not Available | Positive | 2782229 - 2782708 | 18384.5 |
| hypothetical protein | HY78_RS13460 | Not Available | Positive | 2782788 - 2783789 | 37007.8 |
| c-type cytochrome | HY78_RS13465 | Not Available | Negative | 2783794 - 2784159 | 12567.5 |
| integration host factor subunit beta | HY78_RS13470 | Not Available | Positive | 2784377 - 2784700 | 12030.5 |
| polysaccharide biosynthesis/export family protein | HY78_RS13475 | Not Available | Positive | 2785315 - 2785950 | 21913.6 |
| lipopolysaccharide biosynthesis protein | HY78_RS13480 | Not Available | Positive | 2786795 - 2788600 | 65104.4 |
| cpsd/capb family tyrosine-protein kinase | HY78_RS13485 | Not Available | Positive | 2788597 - 2789382 | 28699.2 |
| acid phosphatase | HY78_RS13490 | Not Available | Positive | 2789424 - 2790212 | 28156.8 |
| hypothetical protein | HY78_RS13495 | Not Available | Negative | 2790324 - 2790521 | 6295.35 |
| vacj family lipoprotein | HY78_RS13500 | Not Available | Negative | 2790661 - 2791608 | 32537.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
