Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HY78_RS13405 | Not Available | Negative | 2768230 - 2768475 | 9148.09 |
| glsb/yeaq/ymge family stress response membrane protein | HY78_RS13410 | Not Available | Positive | 2768651 - 2768917 | 9112.64 |
| peptidase m61 | HY78_RS13415 | Not Available | Negative | 2768928 - 2770715 | 63526.8 |
| tonb-dependent receptor | HY78_RS13420 | Not Available | Negative | 2770811 - 2773144 | 82158.9 |
| pyridoxal phosphate-dependent aminotransferase | HY78_RS13425 | Not Available | Negative | 2773331 - 2774521 | 43116.5 |
| apc family permease | HY78_RS13430 | Not Available | Negative | 2774602 - 2775936 | 46288.4 |
| s10 family peptidase | HY78_RS13435 | Not Available | Negative | 2775933 - 2777426 | 52482.9 |
| amidohydrolase family protein | HY78_RS13440 | Not Available | Negative | 2777416 - 2779524 | 75916.9 |
| ornithine cyclodeaminase family protein | HY78_RS13445 | Not Available | Negative | 2779521 - 2780489 | 33566.0 |
| s10 family peptidase | HY78_RS13450 | Not Available | Negative | 2780507 - 2781991 | 53416.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
