Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asma family protein | HY78_RS13355 | Not Available | Negative | 2758704 - 2760836 | 77174.1 |
| 50s ribosomal protein l35 | HY78_RS13360 | Not Available | Positive | 2761003 - 2761206 | 7487.29 |
| 50s ribosomal protein l20 | HY78_RS13365 | Not Available | Positive | 2761221 - 2761598 | 13874.1 |
| giy-yig nuclease family protein | HY78_RS13370 | Not Available | Positive | 2761786 - 2762094 | 11736.1 |
| phenylalanine--trna ligase subunit alpha | HY78_RS13375 | Not Available | Positive | 2762211 - 2763293 | 39433.2 |
| phenylalanine--trna ligase subunit beta | HY78_RS13380 | Not Available | Positive | 2763290 - 2765668 | 83479.0 |
| dna-3-methyladenine glycosylase family protein | HY78_RS13385 | Not Available | Negative | 2765826 - 2766470 | 23131.7 |
| 2fe-2s iron-sulfur cluster-binding protein | HY78_RS13390 | Not Available | Positive | 2766552 - 2766869 | 11333.3 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | HY78_RS13395 | Not Available | Negative | 2767211 - 2767954 | 26224.6 |
| Trna-tyr | Not Available | Not Available | Positive | 2768080 - 2768165 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
