Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | HY78_RS13305 | Not Available | Negative | 2750548 - 2751489 | 32131.7 |
| hypothetical protein | HY78_RS13310 | Not Available | Negative | 2751503 - 2751844 | 12877.7 |
| energy transducer tonb | HY78_RS13315 | Not Available | Negative | 2751910 - 2752542 | 22621.5 |
| pspc domain-containing protein | HY78_RS13320 | Not Available | Positive | 2753033 - 2753233 | 7047.94 |
| glutamate--trna ligase | HY78_RS13325 | Not Available | Negative | 2753280 - 2754611 | 48345.8 |
| ribose-phosphate pyrophosphokinase | HY78_RS13330 | Not Available | Positive | 2754743 - 2755678 | 33119.8 |
| sdr family oxidoreductase | HY78_RS13335 | Not Available | Positive | 2755683 - 2756978 | 44821.5 |
| duf2269 family protein | HY78_RS13340 | Not Available | Positive | 2756975 - 2757448 | 17434.0 |
| voc family protein | HY78_RS13345 | Not Available | Negative | 2757458 - 2757880 | 15112.7 |
| histidinol-phosphatase | HY78_RS13350 | Not Available | Positive | 2757937 - 2758701 | 27134.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
