Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rraa family protein | HY78_RS13205 | Not Available | Positive | 2731101 - 2731817 | 24776.8 |
| lysr family transcriptional regulator | HY78_RS13210 | Not Available | Positive | 2731821 - 2732756 | 35123.4 |
| Trna-ala | Not Available | Not Available | Positive | 2733064 - 2733139 | Not Available |
| tigr02300 family protein | HY78_RS13220 | Not Available | Negative | 2733296 - 2733616 | 11700.0 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | HY78_RS13225 | Not Available | Positive | 2733733 - 2735079 | 46071.9 |
| (d)cmp kinase | HY78_RS13230 | Not Available | Positive | 2735076 - 2735702 | 21442.5 |
| 30s ribosomal protein s1 | HY78_RS13235 | Not Available | Positive | 2735986 - 2737695 | 61625.3 |
| gnat family n-acetyltransferase | HY78_RS13240 | Not Available | Positive | 2737780 - 2738346 | 20585.5 |
| is30 family transposase | HY78_RS13245 | Not Available | Positive | 2738495 - 2739493 | 38600.4 |
| capsule biosynthesis protein | HY78_RS13250 | Not Available | Negative | 2739546 - 2740808 | 46875.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
