Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ntp transferase domain-containing protein | HY78_RS13055 | Not Available | Negative | 2698358 - 2699200 | 29408.0 |
| phosphoribosylglycinamide synthetase | HY78_RS13060 | Not Available | Negative | 2699187 - 2700221 | 38230.2 |
| sugar-transfer associated atp-grasp domain-containing protein | HY78_RS13065 | Not Available | Negative | 2700321 - 2701466 | 40938.8 |
| glycosyltransferase | HY78_RS13070 | Not Available | Positive | 2701540 - 2702664 | 40127.8 |
| lipopolysaccharide biosynthesis protein | HY78_RS13075 | Not Available | Positive | 2702661 - 2703971 | 44130.6 |
| malonate--coa ligase | HY78_RS13080 | Not Available | Positive | 2704012 - 2705526 | 53710.3 |
| 2-hydroxyacid dehydrogenase | HY78_RS13085 | Not Available | Negative | 2705579 - 2706508 | 33392.4 |
| nucleoside diphosphate kinase regulator | HY78_RS13090 | Not Available | Negative | 2706592 - 2707005 | 15027.2 |
| peptidylprolyl isomerase | HY78_RS13095 | Not Available | Negative | 2707217 - 2707900 | 23584.8 |
| sulfonate abc transporter permease | HY78_RS13100 | Not Available | Positive | 2708187 - 2709792 | 58225.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
