Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor plug domain-containing protein | HY78_RS13005 | Not Available | Positive | 2687108 - 2689636 | 89034.8 |
| fad/nad(p)-binding protein | HY78_RS13010 | Not Available | Positive | 2689640 - 2691028 | 49727.8 |
| hydroxyacylglutathione hydrolase | HY78_RS13015 | Not Available | Negative | 2691052 - 2691822 | 27936.2 |
| srpbcc family protein | HY78_RS13020 | Not Available | Negative | 2691822 - 2692265 | 15897.2 |
| lrp/asnc family transcriptional regulator | HY78_RS13025 | Not Available | Negative | 2692296 - 2692817 | 19169.9 |
| aromatic ring-hydroxylating oxygenase subunit alpha | HY78_RS13030 | Not Available | Positive | 2692999 - 2693997 | 36696.5 |
| hypothetical protein | HY78_RS13035 | Not Available | Positive | 2694024 - 2694461 | 15516.5 |
| tonb-dependent receptor | HY78_RS13040 | Not Available | Positive | 2694509 - 2696710 | 79827.2 |
| rida family protein | HY78_RS13045 | Not Available | Positive | 2696710 - 2697093 | 13458.0 |
| nad(p)/fad-dependent oxidoreductase | HY78_RS13050 | Not Available | Positive | 2697057 - 2698361 | 44847.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
