Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine--trna ligase | HY78_RS12855 | Not Available | Positive | 2652051 - 2653298 | 45165.8 |
| peptide chain release factor 1 | HY78_RS12860 | Not Available | Positive | 2653303 - 2654385 | 39446.7 |
| peptide chain release factor n(5)-glutamine methyltransferase | HY78_RS12865 | Not Available | Positive | 2654511 - 2655338 | 28359.2 |
| duf4167 domain-containing protein | HY78_RS12870 | Not Available | Positive | 2655633 - 2656442 | 29633.9 |
| hypothetical protein | HY78_RS12875 | Not Available | Negative | 2656529 - 2656843 | 11393.9 |
| cbs domain-containing protein | HY78_RS12880 | Not Available | Positive | 2656988 - 2657419 | 15748.5 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2657983 - 2659477 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 2659644 - 2659720 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 2659737 - 2659812 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2660066 - 2662860 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
