Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l11 | HY78_RS12705 | Not Available | Negative | 2630190 - 2630621 | 15164.5 |
| transcription termination/antitermination protein nusg | HY78_RS12710 | Not Available | Negative | 2630836 - 2631375 | 19915.9 |
| preprotein translocase subunit sece | HY78_RS12715 | Not Available | Negative | 2631397 - 2631594 | 7279.28 |
| Trna-trp | Not Available | Not Available | Positive | 2631737 - 2631812 | Not Available |
| hypothetical protein | HY78_RS12725 | Not Available | Negative | 2631914 - 2632651 | 26172.6 |
| fatty acyl-amp ligase | HY78_RS12730 | Not Available | Negative | 2632662 - 2634386 | 62527.4 |
| regulatory protein recx | HY78_RS12735 | Not Available | Positive | 2634533 - 2635078 | 19994.8 |
| cold-shock protein | HY78_RS12740 | Not Available | Positive | 2635190 - 2635786 | 21614.8 |
| duf192 domain-containing protein | HY78_RS12745 | Not Available | Positive | 2635789 - 2636265 | 16357.9 |
| nadh:ubiquinone oxidoreductase subunit ndufa12 | HY78_RS12750 | Not Available | Positive | 2636442 - 2636825 | 13981.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
