Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system f family protein | HY78_RS12605 | Not Available | Positive | 2607568 - 2608788 | 42929.3 |
| hypothetical protein | HY78_RS12610 | Not Available | Negative | 2608947 - 2609684 | 24953.4 |
| penicillin-binding protein activator | HY78_RS12615 | Not Available | Positive | 2609639 - 2610703 | 35746.1 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | HY78_RS12620 | Not Available | Positive | 2610739 - 2611347 | 21516.1 |
| general secretion pathway protein gspk | HY78_RS12625 | Not Available | Positive | 2611503 - 2612342 | 28682.8 |
| m28 family metallopeptidase | HY78_RS12630 | Not Available | Positive | 2612405 - 2614060 | 58217.4 |
| glycosyltransferase family 4 protein | HY78_RS12635 | Not Available | Positive | 2614179 - 2616482 | 81588.0 |
| glycoside hydrolase family 130 protein | HY78_RS12640 | Not Available | Positive | 2616535 - 2617821 | 47194.3 |
| tonb-dependent receptor domain-containing protein | HY78_RS12645 | Not Available | Negative | 2617889 - 2620582 | 97794.3 |
| hypothetical protein | HY78_RS12650 | Not Available | Negative | 2620661 - 2622184 | 51543.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
