Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | HY78_RS12505 | Not Available | Negative | 2590857 - 2592824 | 69881.1 |
| hypothetical protein | HY78_RS12510 | Not Available | Positive | 2592978 - 2593178 | 7480.91 |
| cell division protein zapa | HY78_RS12515 | Not Available | Positive | 2593178 - 2593519 | 12256.5 |
| giy-yig nuclease family protein | HY78_RS12520 | Not Available | Negative | 2593573 - 2593875 | 11627.9 |
| 5-formyltetrahydrofolate cyclo-ligase | HY78_RS12525 | Not Available | Positive | 2594182 - 2594760 | 20129.1 |
| duf2842 domain-containing protein | HY78_RS12530 | Not Available | Positive | 2594757 - 2594972 | 7971.17 |
| ggdef domain-containing protein | HY78_RS12535 | Not Available | Positive | 2595116 - 2596084 | 34500.0 |
| nad(+) synthase | HY78_RS12540 | Not Available | Positive | 2596299 - 2598362 | 74100.4 |
| hypothetical protein | HY78_RS12545 | Not Available | Positive | 2598382 - 2598681 | 10990.5 |
| hypothetical protein | HY78_RS12550 | Not Available | Positive | 2598639 - 2599064 | 14676.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
