Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class v-fold plp-dependent enzyme | HY78_RS12455 | Not Available | Positive | 2579496 - 2580599 | 40030.2 |
| hypothetical protein | HY78_RS12460 | Not Available | Positive | 2580661 - 2580990 | 11541.6 |
| tolc family protein | HY78_RS12465 | Not Available | Positive | 2581048 - 2582325 | 43592.9 |
| efflux rnd transporter periplasmic adaptor subunit | HY78_RS12470 | Not Available | Positive | 2582334 - 2583485 | 39041.6 |
| efflux rnd transporter permease subunit | HY78_RS12475 | Not Available | Positive | 2583490 - 2586675 | 112876.0 |
| fructose bisphosphate aldolase | HY78_RS12480 | Not Available | Negative | 2586719 - 2587615 | 32097.9 |
| voc family protein | HY78_RS12485 | Not Available | Negative | 2587629 - 2588063 | 15468.5 |
| phosphoglycerate kinase | HY78_RS12490 | Not Available | Negative | 2588065 - 2589258 | 41439.7 |
| mosc domain-containing protein | HY78_RS12495 | Not Available | Negative | 2589261 - 2589716 | 16329.8 |
| type i glyceraldehyde-3-phosphate dehydrogenase | HY78_RS12500 | Not Available | Negative | 2589834 - 2590841 | 35650.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
