Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor plug domain-containing protein | HY78_RS12405 | Not Available | Positive | 2569380 - 2571995 | 91838.8 |
| amidase | HY78_RS12410 | Not Available | Positive | 2572018 - 2573550 | 52295.0 |
| lysr substrate-binding domain-containing protein | HY78_RS12415 | Not Available | Negative | 2573556 - 2574449 | 32160.7 |
| nad(p)/fad-dependent oxidoreductase | HY78_RS12420 | Not Available | Negative | 2574536 - 2575747 | 43594.1 |
| copper homeostasis membrane protein copd | HY78_RS12425 | Not Available | Negative | 2575837 - 2576709 | 30126.6 |
| copper homeostasis periplasmic binding protein copc | HY78_RS12430 | Not Available | Negative | 2576712 - 2577104 | 13292.3 |
| hypothetical protein | HY78_RS12435 | Not Available | Positive | 2577223 - 2577504 | 9277.35 |
| periplasmic heavy metal sensor | HY78_RS12440 | Not Available | Positive | 2577506 - 2577940 | 15911.4 |
| rna polymerase sigma factor | HY78_RS12445 | Not Available | Positive | 2577937 - 2578515 | 21443.8 |
| hypothetical protein | HY78_RS12450 | Not Available | Positive | 2578620 - 2579156 | 18649.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
