Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | HY78_RS12355 | Not Available | Positive | 2558849 - 2559766 | 34428.9 |
| rida family protein | HY78_RS12360 | Not Available | Negative | 2559786 - 2560301 | 17830.7 |
| dicarboxylate/amino acid:cation symporter | HY78_RS12365 | Not Available | Negative | 2560301 - 2561554 | 43426.2 |
| ybdd/yjix family protein | HY78_RS12370 | Not Available | Negative | 2561566 - 2561751 | 7029.41 |
| carbon starvation csta family protein | HY78_RS12375 | Not Available | Negative | 2561748 - 2563796 | 72300.2 |
| trans-sulfuration enzyme family protein | HY78_RS12380 | Not Available | Positive | 2563911 - 2565206 | 46126.8 |
| amino acid abc transporter substrate-binding protein | HY78_RS12385 | Not Available | Positive | 2565209 - 2566252 | 37775.2 |
| abc transporter permease subunit | HY78_RS12390 | Not Available | Positive | 2566252 - 2567379 | 40042.9 |
| amino acid abc transporter permease | HY78_RS12395 | Not Available | Positive | 2567376 - 2568464 | 38986.7 |
| amino acid abc transporter atp-binding protein | HY78_RS12400 | Not Available | Positive | 2568470 - 2569186 | 26426.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
