Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | HY78_RS12255 | Not Available | Positive | 2537565 - 2538071 | 17773.2 |
| hypothetical protein | HY78_RS12260 | Not Available | Positive | 2538988 - 2539482 | 18531.2 |
| daph/dapd/glmu-related protein | HY78_RS12265 | Not Available | Positive | 2539800 - 2540153 | 12773.1 |
| glycosyltransferase family 2 protein | HY78_RS12270 | Not Available | Positive | 2540143 - 2540619 | 18199.3 |
| is1595 family transposase | HY78_RS12275 | Not Available | Positive | 2540695 - 2541717 | 37810.0 |
| is1595 family transposase | HY78_RS12280 | Not Available | Negative | 2541889 - 2542911 | 37810.0 |
| is1380 family transposase | HY78_RS12285 | Not Available | Negative | 2544608 - 2545978 | 50239.4 |
| asparagine synthase (glutamine-hydrolyzing) | HY78_RS12290 | Not Available | Positive | 2546159 - 2548126 | 73426.0 |
| glycosyltransferase family 4 protein | HY78_RS12295 | Not Available | Positive | 2548123 - 2549277 | 41431.2 |
| legc family aminotransferase | HY78_RS12300 | Not Available | Positive | 2549298 - 2550458 | 41146.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
