Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(37)-n1)-methyltransferase trmd | HY78_RS12205 | Not Available | Negative | 2528695 - 2529435 | 26794.0 |
| type ii toxin-antitoxin system vapc family toxin | HY78_RS12210 | Not Available | Negative | 2529446 - 2529820 | 13382.2 |
| abrb/maze/spovt family dna-binding domain-containing protein | HY78_RS12215 | Not Available | Negative | 2529821 - 2530096 | 9947.98 |
| hypothetical protein | HY78_RS12220 | Not Available | Negative | 2530144 - 2530422 | 9870.87 |
| ribosome maturation factor rimm | HY78_RS12225 | Not Available | Negative | 2530419 - 2530892 | 16622.1 |
| 30s ribosomal protein s16 | HY78_RS12230 | Not Available | Negative | 2531008 - 2531472 | 16458.2 |
| signal recognition particle protein | HY78_RS12235 | Not Available | Negative | 2531510 - 2532985 | 51422.6 |
| gamma-glutamyltransferase | HY78_RS12240 | Not Available | Positive | 2533222 - 2534958 | 60244.6 |
| is1595 family transposase | HY78_RS12245 | Not Available | Positive | 2535887 - 2536909 | 37810.0 |
| polysaccharide biosynthesis c-terminal domain-containing protein | HY78_RS12250 | Not Available | Positive | 2537149 - 2537565 | 14480.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
