Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | HY78_RS12155 | Not Available | Positive | 2517810 - 2518760 | 35084.1 |
| glycosyltransferase family 4 protein | HY78_RS12160 | Not Available | Positive | 2518998 - 2520224 | 44257.5 |
| peroxiredoxin | HY78_RS12165 | Not Available | Positive | 2520221 - 2520703 | 16794.2 |
| amp nucleosidase | HY78_RS12170 | Not Available | Positive | 2520835 - 2522283 | 53564.9 |
| sensor domain-containing diguanylate cyclase | HY78_RS12175 | Not Available | Negative | 2522431 - 2523603 | 41554.0 |
| m2 family metallopeptidase | HY78_RS12180 | Not Available | Negative | 2523899 - 2525761 | 68350.4 |
| alpha/beta fold hydrolase | HY78_RS12185 | Not Available | Negative | 2525867 - 2526640 | 27117.6 |
| gfa family protein | HY78_RS12190 | Not Available | Negative | 2526621 - 2527064 | 16544.5 |
| aspartate-semialdehyde dehydrogenase | HY78_RS12195 | Not Available | Negative | 2527169 - 2528194 | 37308.0 |
| 50s ribosomal protein l19 | HY78_RS12200 | Not Available | Negative | 2528303 - 2528692 | 14499.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
