Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HY78_RS11955 | Not Available | Positive | 2474510 - 2475073 | 19312.7 |
| atp12 family chaperone protein | HY78_RS11960 | Not Available | Negative | 2475204 - 2475896 | 24949.6 |
| had hydrolase-like protein | HY78_RS11965 | Not Available | Negative | 2475893 - 2476585 | 24321.1 |
| rlua family pseudouridine synthase | HY78_RS11970 | Not Available | Negative | 2476582 - 2477688 | 40477.1 |
| fluoride efflux transporter crcb | HY78_RS11975 | Not Available | Negative | 2477685 - 2478062 | 12893.3 |
| hypothetical protein | HY78_RS11980 | Not Available | Negative | 2478116 - 2478652 | 17845.2 |
| hypothetical protein | HY78_RS11985 | Not Available | Positive | 2478749 - 2478970 | 7804.09 |
| crp/fnr family transcriptional regulator | HY78_RS11990 | Not Available | Positive | 2479107 - 2479793 | 25048.1 |
| pseudouridine synthase | HY78_RS11995 | Not Available | Positive | 2479895 - 2480755 | 31450.3 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | HY78_RS12000 | Not Available | Positive | 2480752 - 2481273 | 17993.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
