Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | HY78_RS11805 | Not Available | Negative | 2441837 - 2442934 | 39547.0 |
| had family hydrolase | HY78_RS11810 | Not Available | Positive | 2443041 - 2443712 | 25027.5 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | HY78_RS11815 | Not Available | Positive | 2443767 - 2444030 | 9529.58 |
| type ii toxin-antitoxin system rele/pare family toxin | HY78_RS11820 | Not Available | Positive | 2444034 - 2444390 | 12938.7 |
| chap domain-containing protein | HY78_RS11825 | Not Available | Negative | 2444458 - 2445033 | 20420.8 |
| dihydroorotase | HY78_RS11830 | Not Available | Negative | 2445350 - 2446675 | 47734.0 |
| ygfz/gcvt domain-containing protein | HY78_RS11835 | Not Available | Positive | 2446716 - 2447384 | 24147.9 |
| mfs transporter | HY78_RS11840 | Not Available | Negative | 2447395 - 2448726 | 47914.1 |
| lyttr family dna-binding domain-containing protein | HY78_RS11845 | Not Available | Negative | 2448794 - 2449690 | 32656.3 |
| hypothetical protein | HY78_RS11850 | Not Available | Positive | 2449841 - 2450866 | 36426.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
