Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein muts | HY78_RS11705 | Not Available | Negative | 2416500 - 2419214 | 95829.1 |
| nadp-dependent malic enzyme | HY78_RS11710 | Not Available | Positive | 2419243 - 2421504 | 80618.3 |
| hypothetical protein | HY78_RS11715 | Not Available | Negative | 2421663 - 2422388 | 25512.8 |
| hypothetical protein | HY78_RS11720 | Not Available | Negative | 2422445 - 2423206 | 25385.1 |
| alpha/beta hydrolase | HY78_RS11725 | Not Available | Negative | 2423206 - 2423940 | 26301.5 |
| m48 family metallopeptidase | HY78_RS11730 | Not Available | Negative | 2424039 - 2425103 | 37895.8 |
| yjgn family protein | HY78_RS11735 | Not Available | Negative | 2425087 - 2426148 | 39483.5 |
| aminopeptidase n | HY78_RS11740 | Not Available | Negative | 2426302 - 2428899 | 95813.7 |
| epimerase | HY78_RS11745 | Not Available | Positive | 2428971 - 2429753 | 27468.7 |
| hypothetical protein | HY78_RS11750 | Not Available | Negative | 2429783 - 2431261 | 52729.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
