Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | HY78_RS11655 | Not Available | Positive | 2407096 - 2407518 | 15373.4 |
| gnat family n-acetyltransferase | HY78_RS11660 | Not Available | Positive | 2407515 - 2408030 | 18082.4 |
| shikimate kinase | HY78_RS11665 | Not Available | Positive | 2408060 - 2408587 | 18501.6 |
| [protein-pii] uridylyltransferase | HY78_RS11670 | Not Available | Negative | 2408604 - 2411366 | 103012.0 |
| duf983 domain-containing protein | HY78_RS11675 | Not Available | Negative | 2411426 - 2411869 | 16196.9 |
| plp-dependent aminotransferase family protein | HY78_RS11680 | Not Available | Positive | 2411951 - 2413312 | 47374.3 |
| paai family thioesterase | HY78_RS11685 | Not Available | Positive | 2413322 - 2413753 | 15442.9 |
| methyltransferase domain-containing protein | HY78_RS11690 | Not Available | Positive | 2413762 - 2414754 | 36782.2 |
| hypothetical protein | HY78_RS11695 | Not Available | Negative | 2414764 - 2415345 | 19769.4 |
| class i sam-dependent methyltransferase | HY78_RS11700 | Not Available | Negative | 2415494 - 2416447 | 35346.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
