Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna replication/repair protein recf | HY78_RS11505 | Not Available | Negative | 2380103 - 2381173 | 37675.3 |
| voc family protein | HY78_RS11510 | Not Available | Positive | 2381291 - 2381707 | 15682.6 |
| hydroxyacylglutathione hydrolase | HY78_RS11515 | Not Available | Positive | 2381622 - 2382440 | 29263.9 |
| hypothetical protein | HY78_RS11520 | Not Available | Positive | 2382449 - 2382865 | 15017.3 |
| glutaminase | HY78_RS11525 | Not Available | Negative | 2382985 - 2383941 | 33704.6 |
| dna polymerase iii subunit beta | HY78_RS11530 | Not Available | Negative | 2383980 - 2385092 | 40191.5 |
| outer membrane protein | HY78_RS11535 | Not Available | Negative | 2385289 - 2385855 | 19381.6 |
| hypothetical protein | HY78_RS11540 | Not Available | Positive | 2386004 - 2386492 | 17649.3 |
| ligase-associated dna damage response dexh box helicase | HY78_RS11545 | Not Available | Negative | 2386521 - 2388926 | 87995.0 |
| phosphoglucomutase/phosphomannomutase pgmg | HY78_RS11550 | Not Available | Negative | 2389044 - 2390426 | 50082.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
