Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HY78_RS11455 | Not Available | Positive | 2369576 - 2369899 | 11493.0 |
| duf1993 family protein | HY78_RS11460 | Not Available | Positive | 2370026 - 2370577 | 19746.5 |
| srpbcc family protein | HY78_RS11465 | Not Available | Positive | 2370574 - 2371104 | 17772.5 |
| yaii/yqxd family protein | HY78_RS11470 | Not Available | Negative | 2371079 - 2371558 | 16716.3 |
| rdd family protein | HY78_RS11475 | Not Available | Positive | 2371682 - 2372653 | 35364.7 |
| duf2339 domain-containing protein | HY78_RS11480 | Not Available | Positive | 2372736 - 2375570 | 98430.0 |
| duf3999 family protein | HY78_RS11485 | Not Available | Positive | 2375567 - 2376220 | 22322.5 |
| duf3999 family protein | HY78_RS11490 | Not Available | Positive | 2376112 - 2376915 | 28186.0 |
| dna topoisomerase (atp-hydrolyzing) subunit b | HY78_RS11495 | Not Available | Negative | 2377013 - 2379493 | 90777.0 |
| fluoride efflux transporter crcb | HY78_RS11500 | Not Available | Positive | 2379697 - 2380074 | 13067.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
