Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yjbe family putative metal transport protein | HY78_RS11305 | Not Available | Negative | 2346908 - 2347558 | 22949.9 |
| class i sam-dependent methyltransferase | HY78_RS11310 | Not Available | Negative | 2347607 - 2348479 | 30654.6 |
| helix-turn-helix domain-containing protein | HY78_RS11315 | Not Available | Positive | 2348538 - 2348939 | 15144.6 |
| class i sam-dependent methyltransferase | HY78_RS11320 | Not Available | Negative | 2348988 - 2349692 | 26647.3 |
| transcription termination factor rho | HY78_RS11325 | Not Available | Negative | 2349711 - 2350967 | 46543.2 |
| copd family protein | HY78_RS11330 | Not Available | Negative | 2351227 - 2351679 | 17094.4 |
| uroporphyrinogen decarboxylase | HY78_RS11335 | Not Available | Negative | 2351684 - 2352718 | 37252.7 |
| pyruvate, water dikinase regulatory protein | HY78_RS11340 | Not Available | Positive | 2353157 - 2353981 | 30460.5 |
| maf family protein | HY78_RS11345 | Not Available | Positive | 2354148 - 2354741 | 21270.7 |
| shikimate dehydrogenase | HY78_RS11350 | Not Available | Positive | 2354738 - 2355607 | 31853.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
