Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase family protein | HY78_RS11005 | Not Available | Positive | 2282820 - 2283689 | 30376.2 |
| duf952 domain-containing protein | HY78_RS11010 | Not Available | Positive | 2283707 - 2284054 | 12173.4 |
| hypothetical protein | HY78_RS11015 | Not Available | Negative | 2284160 - 2284624 | 16675.2 |
| helix-turn-helix domain-containing protein | HY78_RS11020 | Not Available | Negative | 2284671 - 2286092 | 52670.1 |
| acyl-coa carboxylase subunit beta | HY78_RS11025 | Not Available | Positive | 2286242 - 2287774 | 55698.9 |
| beta-ketothiolase bktb | HY78_RS11030 | Not Available | Positive | 2287870 - 2289051 | 40812.6 |
| methylmalonyl-coa epimerase | HY78_RS11035 | Not Available | Positive | 2289048 - 2289473 | 15307.5 |
| methylmalonyl-coa mutase | HY78_RS11040 | Not Available | Positive | 2289505 - 2291655 | 77185.3 |
| biotin synthase biob | HY78_RS11045 | Not Available | Positive | 2291652 - 2292668 | 36408.6 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | HY78_RS11050 | Not Available | Positive | 2292790 - 2294772 | 71472.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
