Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nupc/nupg family nucleoside cnt transporter | HY78_RS10955 | Not Available | Positive | 2272986 - 2274245 | 43081.7 |
| rna polymerase factor sigma-54 | HY78_RS10960 | Not Available | Negative | 2274413 - 2275936 | 54709.7 |
| lps export abc transporter atp-binding protein | HY78_RS10965 | Not Available | Negative | 2275974 - 2276750 | 28030.9 |
| lpta/osta family protein | HY78_RS10970 | Not Available | Negative | 2276906 - 2277427 | 18038.7 |
| lps export abc transporter periplasmic protein lptc | HY78_RS10975 | Not Available | Negative | 2277427 - 2278125 | 24907.1 |
| ribonuclease d | HY78_RS10980 | Not Available | Negative | 2278147 - 2278764 | 22806.2 |
| terc family protein | HY78_RS10985 | Not Available | Negative | 2278835 - 2279575 | 26596.5 |
| cold-shock protein | HY78_RS10990 | Not Available | Positive | 2279913 - 2280707 | 26341.6 |
| peptide-methionine (r)-s-oxide reductase msrb | HY78_RS10995 | Not Available | Negative | 2280907 - 2281392 | 17281.7 |
| trna epoxyqueuosine(34) reductase queg | HY78_RS11000 | Not Available | Positive | 2281635 - 2282783 | 40826.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
