Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly protein sufb | HY78_RS10905 | Not Available | Positive | 2263607 - 2265079 | 54164.0 |
| fe-s cluster assembly atpase sufc | HY78_RS10910 | Not Available | Positive | 2265119 - 2265862 | 26624.3 |
| sufb/sufd family protein | HY78_RS10915 | Not Available | Positive | 2266032 - 2267114 | 37883.7 |
| cysteine desulfurase | HY78_RS10920 | Not Available | Positive | 2267111 - 2268325 | 43264.8 |
| suf system fe-s cluster assembly protein | HY78_RS10925 | Not Available | Positive | 2268337 - 2268816 | 16896.9 |
| hesb/isca family protein | HY78_RS10930 | Not Available | Positive | 2268882 - 2269235 | 12220.4 |
| pyrimidine 5'-nucleotidase | HY78_RS10935 | Not Available | Positive | 2269432 - 2270103 | 24924.7 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | HY78_RS10940 | Not Available | Positive | 2270100 - 2270924 | 28728.4 |
| acetylglutamate kinase | HY78_RS10945 | Not Available | Negative | 2271155 - 2272060 | 31839.8 |
| queuosine precursor transporter | HY78_RS10950 | Not Available | Negative | 2272219 - 2272881 | 23349.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
