Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| giy-yig nuclease family protein | HY78_RS10855 | Not Available | Positive | 2252239 - 2252529 | 11094.4 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | HY78_RS10860 | Not Available | Negative | 2252628 - 2254271 | 58767.3 |
| isocitrate lyase | HY78_RS10865 | Not Available | Positive | 2254526 - 2256121 | 59076.0 |
| eal domain-containing protein | HY78_RS10870 | Not Available | Positive | 2256247 - 2257830 | 57539.1 |
| cyanate transporter | HY78_RS10875 | Not Available | Negative | 2257776 - 2259038 | 42683.4 |
| nucleoside deaminase | HY78_RS10880 | Not Available | Negative | 2259004 - 2259495 | 17072.3 |
| amidohydrolase family protein | HY78_RS10885 | Not Available | Negative | 2259492 - 2260943 | 51776.9 |
| lysr family transcriptional regulator | HY78_RS10890 | Not Available | Positive | 2261049 - 2261900 | 30442.7 |
| quinone-dependent dihydroorotate dehydrogenase | HY78_RS10895 | Not Available | Negative | 2261910 - 2262944 | 35868.3 |
| suf system fe-s cluster assembly regulator | HY78_RS10900 | Not Available | Positive | 2263199 - 2263603 | 13731.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
