Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| organic hydroperoxide resistance protein | HY78_RS10705 | Not Available | Negative | 2224640 - 2225065 | 14227.8 |
| marr family transcriptional regulator | HY78_RS10710 | Not Available | Positive | 2225195 - 2225665 | 17028.4 |
| hypothetical protein | HY78_RS10715 | Not Available | Negative | 2225827 - 2226465 | 23286.6 |
| response regulator transcription factor | HY78_RS10720 | Not Available | Positive | 2226718 - 2227392 | 24500.9 |
| sensor histidine kinase | HY78_RS10725 | Not Available | Positive | 2227389 - 2228744 | 47381.4 |
| s9 family peptidase | HY78_RS10730 | Not Available | Positive | 2228829 - 2230916 | 74003.1 |
| acyltransferase family protein | HY78_RS10735 | Not Available | Negative | 2230939 - 2231940 | 36963.7 |
| tonb-dependent receptor | HY78_RS10740 | Not Available | Negative | 2232296 - 2234848 | 91256.2 |
| amp-dependent synthetase/ligase | HY78_RS10745 | Not Available | Negative | 2235338 - 2237113 | 64578.2 |
| j domain-containing protein | HY78_RS10750 | Not Available | Positive | 2237275 - 2237805 | 20170.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
