Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | HY78_RS10605 | Not Available | Negative | 2203792 - 2204418 | 22847.6 |
| pas domain s-box protein | HY78_RS10610 | Not Available | Negative | 2204415 - 2206493 | 76385.3 |
| hpch/hpai aldolase/citrate lyase family protein | HY78_RS10615 | Not Available | Negative | 2206844 - 2207821 | 34198.9 |
| lytr/algr family response regulator transcription factor | HY78_RS10620 | Not Available | Negative | 2207838 - 2208638 | 30310.5 |
| sensor histidine kinase | HY78_RS10625 | Not Available | Negative | 2208635 - 2209744 | 41099.8 |
| hypothetical protein | HY78_RS10630 | Not Available | Positive | 2209985 - 2212051 | 75402.0 |
| argininosuccinate synthase | HY78_RS10635 | Not Available | Negative | 2212142 - 2213359 | 45238.9 |
| hypothetical protein | HY78_RS10640 | Not Available | Positive | 2213476 - 2213955 | 17146.3 |
| hypothetical protein | HY78_RS10645 | Not Available | Positive | 2214169 - 2214798 | 22508.5 |
| tetr/acrr family transcriptional regulator | HY78_RS10650 | Not Available | Negative | 2214915 - 2215511 | 20417.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
