Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | HY78_RS10355 | Not Available | Negative | 2146487 - 2148523 | 74273.2 |
| duf3100 domain-containing protein | HY78_RS10360 | Not Available | Positive | 2148731 - 2149990 | 43135.8 |
| l-serine ammonia-lyase | HY78_RS10365 | Not Available | Positive | 2150004 - 2151383 | 47803.4 |
| dihydroxy-acid dehydratase | HY78_RS10370 | Not Available | Negative | 2151396 - 2153252 | 65832.8 |
| nad-dependent succinate-semialdehyde dehydrogenase | HY78_RS10375 | Not Available | Negative | 2153287 - 2154753 | 51827.9 |
| rida family protein | HY78_RS10380 | Not Available | Negative | 2154750 - 2155154 | 14357.2 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | HY78_RS10385 | Not Available | Negative | 2155151 - 2156452 | 47675.9 |
| mfs transporter | HY78_RS10390 | Not Available | Positive | 2156696 - 2158030 | 46458.8 |
| tonb-dependent receptor plug domain-containing protein | HY78_RS10395 | Not Available | Negative | 2158095 - 2160719 | 93087.6 |
| lrp/asnc family transcriptional regulator | HY78_RS10400 | Not Available | Positive | 2160978 - 2161469 | 18383.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
