Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | HY78_RS10305 | Not Available | Negative | 2132431 - 2133264 | 30183.3 |
| tetr/acrr family transcriptional regulator | HY78_RS10310 | Not Available | Positive | 2133566 - 2134291 | 27173.8 |
| tonb-dependent receptor | HY78_RS10315 | Not Available | Positive | 2134557 - 2136755 | 78744.0 |
| phytanoyl-coa dioxygenase family protein | HY78_RS10320 | Not Available | Positive | 2136777 - 2137613 | 30906.4 |
| voc family protein | HY78_RS10325 | Not Available | Positive | 2137653 - 2138549 | 33108.2 |
| fad-dependent oxidoreductase | HY78_RS10330 | Not Available | Positive | 2138598 - 2140400 | 64946.4 |
| tonb-dependent receptor | HY78_RS10335 | Not Available | Positive | 2140506 - 2142833 | 83569.8 |
| arylsulfatase | HY78_RS10340 | Not Available | Positive | 2142827 - 2144506 | 60325.6 |
| marr family winged helix-turn-helix transcriptional regulator | HY78_RS10345 | Not Available | Positive | 2144537 - 2145061 | 19681.8 |
| amidohydrolase | HY78_RS10350 | Not Available | Negative | 2145276 - 2146490 | 43397.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
