Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rraa family protein | HY78_RS10255 | Not Available | Negative | 2122611 - 2123285 | 22901.3 |
| protocatechuate 3,4-dioxygenase | HY78_RS10260 | Not Available | Negative | 2123282 - 2124304 | 37549.1 |
| amidohydrolase family protein | HY78_RS10265 | Not Available | Negative | 2124323 - 2125324 | 37103.1 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | HY78_RS10270 | Not Available | Negative | 2125356 - 2126651 | 49369.7 |
| flavin-dependent oxidoreductase | HY78_RS10275 | Not Available | Negative | 2126693 - 2127967 | 46607.5 |
| fumarylacetoacetate hydrolase family protein | HY78_RS10280 | Not Available | Negative | 2128154 - 2128837 | 24163.9 |
| gentisate 1,2-dioxygenase | HY78_RS10285 | Not Available | Negative | 2128859 - 2129908 | 38716.6 |
| maleylacetoacetate isomerase | HY78_RS10290 | Not Available | Negative | 2129955 - 2130575 | 22938.8 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | HY78_RS10295 | Not Available | Negative | 2130595 - 2131071 | 17777.4 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | HY78_RS10300 | Not Available | Negative | 2131068 - 2132327 | 47965.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
