Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | HY78_RS10155 | Not Available | Negative | 2100083 - 2101045 | 34768.3 |
| fumarylacetoacetate hydrolase family protein | HY78_RS10160 | Not Available | Positive | 2101185 - 2102054 | 31066.1 |
| ornithine cyclodeaminase family protein | HY78_RS10165 | Not Available | Positive | 2102051 - 2103085 | 36009.4 |
| is30 family transposase | HY78_RS10170 | Not Available | Negative | 2103118 - 2103879 | 29033.0 |
| gntr family transcriptional regulator | HY78_RS10175 | Not Available | Positive | 2103901 - 2104623 | 26204.7 |
| tonb-dependent receptor | HY78_RS10180 | Not Available | Positive | 2104778 - 2106910 | 76774.1 |
| serine hydrolase domain-containing protein | HY78_RS10185 | Not Available | Positive | 2106913 - 2108061 | 41211.1 |
| sdr family nad(p)-dependent oxidoreductase | HY78_RS10190 | Not Available | Positive | 2108058 - 2108825 | 25148.2 |
| mfs transporter | HY78_RS10195 | Not Available | Positive | 2108825 - 2110150 | 44966.2 |
| 3-keto-5-aminohexanoate cleavage protein | HY78_RS10200 | Not Available | Positive | 2110159 - 2111091 | 33848.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
