Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | HY78_RS10105 | Not Available | Negative | 2089066 - 2089488 | 15618.2 |
| voc family protein | HY78_RS10110 | Not Available | Negative | 2089509 - 2090204 | 25255.4 |
| 3-keto-5-aminohexanoate cleavage protein | HY78_RS10115 | Not Available | Negative | 2090322 - 2091254 | 33726.5 |
| serine/threonine protein phosphatase | HY78_RS10120 | Not Available | Negative | 2091292 - 2092575 | 47166.7 |
| tonb-dependent receptor | HY78_RS10125 | Not Available | Negative | 2092652 - 2094991 | 82949.1 |
| acyl-coa dehydrogenase family protein | HY78_RS10130 | Not Available | Negative | 2095327 - 2096541 | 43032.4 |
| nuclear transport factor 2 family protein | HY78_RS10135 | Not Available | Negative | 2096709 - 2097242 | 19531.3 |
| 2-oxo-hept-4-ene-1,7-dioate hydratase | HY78_RS10140 | Not Available | Positive | 2097231 - 2098031 | 28806.5 |
| 4-hydroxy-2-oxoheptanedioate aldolase | HY78_RS10145 | Not Available | Positive | 2098075 - 2098866 | 27815.5 |
| cupin domain-containing protein | HY78_RS10150 | Not Available | Negative | 2098869 - 2099969 | 40394.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
