Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sos response-associated peptidase family protein | HY78_RS10055 | Not Available | Positive | 2071223 - 2071831 | 22654.0 |
| tonb-dependent receptor | HY78_RS10060 | Not Available | Positive | 2072088 - 2074274 | 79173.1 |
| type 1 glutamine amidotransferase | HY78_RS10065 | Not Available | Positive | 2074274 - 2074987 | 25674.6 |
| polysaccharide deacetylase family protein | HY78_RS10070 | Not Available | Positive | 2074975 - 2075874 | 33638.9 |
| n,n-dimethylformamidase beta subunit family domain-containing protein | HY78_RS10075 | Not Available | Positive | 2075871 - 2077382 | 54747.0 |
| tetr/acrr family transcriptional regulator | HY78_RS10080 | Not Available | Positive | 2077486 - 2078154 | 25509.5 |
| is1380 family transposase | HY78_RS10085 | Not Available | Negative | 2078437 - 2079786 | 49607.8 |
| ankyrin repeat domain-containing protein | HY78_RS10090 | Not Available | Positive | 2079947 - 2083435 | 123065.0 |
| hypothetical protein | HY78_RS10095 | Not Available | Positive | 2083444 - 2086542 | 110177.0 |
| cytochrome p450/oxidoreductase | HY78_RS10100 | Not Available | Negative | 2086553 - 2088862 | 85223.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
